FODMAP Friendly Cheese Puffs (The Ultimate Gut-Friendly Snack!)

Featured in Snacks.

Light, airy, cheesy, and addictive little puffs of joy that are completely gluten-free and low-FODMAP. This simple recipe for cheese puffs, inspired by Pão de Queijo, will be your new favorite savory snack.
Mary Dona
Updated on Wed Aug 06 2025 at 02:35 PM
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FODMAP Friendly Cheese Puffs (The Ultimate Gut-Friendly Snack!) | Falfy

When you're on a low-FODMAP diet, snack time can feel... bleak. There's a lot of rice cakes and plain crackers. I was desperately missing something warm, savory, and cheesy that wouldn't send my stomach into a rebellion. I stumbled upon Brazilian cheese bread (Pão de Queijo) and realized its magic ingredient, tapioca flour, was my ticket to happiness. After a few rounds of testing to get the cheese right and swap in some gut-friendly flavor, this recipe was born. These little puffs are crispy on the outside, delightfully chewy on the inside, and packed with cheesy flavor. They're my little bite-sized victory against dietary restrictions.

The first time I made these, the 'dough' was this bizarre, sticky, stretchy goo. I was 100% convinced I had failed. I almost threw it out, but figured I'd bake it anyway just to see what happened. I scooped the sticky blobs onto the baking sheet, put them in the oven, and walked away defeated. When I came back 20 minutes later, they had transformed into these perfect, golden, puffy balls. It was a lesson in trusting the weird, wonderful process of tapioca flour!

Ingredients

  • Tapioca Flour (or Tapioca Starch): This is the star of the show. It's not optional and cannot be substituted with other flours! It's what creates the signature chewy, stretchy texture. You can find it in most major supermarkets now, usually in the gluten-free section.
  • Aged Hard Cheese: This is key for being low-FODMAP. Hard, aged cheeses like sharp cheddar, parmesan, or pecorino are naturally very low in lactose. Do not use soft cheeses like mozzarella or cream cheese. I always grate my own.
  • Lactose-Free Milk: A simple swap to keep things gut-friendly. Any unsweetened plain alternative milk like almond milk also works.
  • Garlic-Infused Oil: This is our secret weapon for getting that delicious garlic flavor without the high-FODMAP fructans. You can buy it or make your own, but don't skip it!
  • Egg: This acts as a binder and helps the puffs rise and get, well, puffy.

Instructions

Prep and Heat Liquids:
Preheat your oven to 400°F (200°C) and line a baking sheet with parchment paper. In a small saucepan, combine the lactose-free milk, garlic-infused oil, and salt. Heat over medium until it's simmering gently around the edges. Don't let it come to a rolling boil.
Make the Dough Base:
Remove the saucepan from the heat. Immediately dump in all of the tapioca flour at once. Start stirring vigorously with a wooden spoon. It will look like a shaggy, lumpy mess at first, but keep stirring until it forms a smooth, sticky, elastic-like ball of dough. This happens fast!
Cool it Down:
Let the dough rest in the saucepan for about 5-10 minutes. It needs to be cool enough that it won't scramble the egg when you add it. You should be able to touch it without it being painfully hot.
Beat in Egg and Cheese:
Now for the fun part. Add the cracked egg to the dough. Start beating it in with your spoon (or an electric mixer if you prefer). The dough will separate and look slippery and awful. Keep going! It will magically come back together into a smooth, glossy, very sticky dough. Once the egg is fully incorporated, stir in your grated cheese.
Scoop and Bake:
Using a small cookie scoop or two spoons, drop rounded tablespoons of the sticky dough onto your prepared baking sheet, about 1-2 inches apart. They will spread and puff up.
The Magic Puff:
Bake for 20-25 minutes, until the puffs are golden brown and beautifully puffed up. Do NOT open the oven door for the first 15 minutes, or they might deflate. They are best served warm right out of the oven.

My proudest moment was serving these at a party without telling anyone they were 'special.' They were the first thing to disappear from the snack table. My friend, who is a notorious cheese fiend, grabbed me and said 'I need this recipe!' Seeing people love food that also happens to be safe for me to eat is the absolute best feeling.

Storage Tips

These are truly best eaten within an hour of baking. They will deflate a bit as they cool. You can store leftovers in an airtight container at room temperature for up to 2 days, but they will lose their crispness. To bring them back to life, pop them in a 350°F (175°C) oven for 5 minutes.

Ingredient Substitutions

Cheese Variations: Any low-lactose hard cheese works! Try a mix of Parmesan and cheddar. Add Herbs: Stir in a tablespoon of finely chopped fresh chives or rosemary with the cheese for extra flavor. Spice it Up: Add a pinch of cayenne pepper or smoked paprika to the dough with the salt.

Serving Suggestions

As a snack: Perfect on their own, warm from the oven. With Soup: An amazing side for a bowl of low-FODMAP tomato or vegetable soup. For a Party: Pile them high on a platter. They'll be gone in minutes. Breakfast: I've been known to eat a few with my morning eggs.

The Story Behind the Recipe

This recipe is my answer to the restrictive nature of low-FODMAP eating. It's proof that you don't have to give up comforting, delicious food. It's about finding clever swaps like tapioca flour for wheat, and garlic-infused oil for fresh garlic to recreate the flavors and textures you miss. For me, these cheese puffs taste like freedom and pure, simple joy.

If you have some extra Cheese on hand, put it to good use in our popular recipe for Gluten-Free Street Corn Chicken Skillet.

Baking on a low-FODMAP diet can feel intimidating, but recipes like this make it fun. It’s a little bit of kitchen science that results in a wonderfully satisfying treat. I hope they bring as much happiness to your tummy as they do to mine!

Frequently Asked Questions

→ What's the difference between tapioca flour and tapioca starch?

In most places (especially the US), they are the exact same product, just labeled differently. Both will work perfectly here.

→ Why did my cheese puffs come out flat?

This usually happens for two reasons: the oven door was opened too early, causing them to deflate, or the dough was too wet. Make sure your liquid measurements are accurate!

→ Can I freeze the dough?

Yes! Scoop the dough onto a parchment-lined baking sheet, freeze until solid, then transfer to a freezer bag. You can bake them straight from frozen; just add about 5-7 minutes to the baking time.

→ What other cheeses are low-FODMAP?

According to Monash University, hard and aged cheeses like Parmesan, cheddar, Colby, and Swiss are low in lactose and generally well-tolerated in servings of around 40g.

FODMAP Friendly Cheese Puffs (The Ultimate Gut-Friendly Snack!)

Light, airy, cheesy, and addictive little puffs of joy that are completely gluten-free and low-FODMAP. This simple recipe for cheese puffs, inspired by Pão de Queijo, will be your new favorite savory snack.

Prep Time
15 Minutes
Cook Time
25 Minutes
Total Time
15 Minutes + 25 Minutes
By: Mary Dona

Category: Snacks

Difficulty: Beginner

Cuisine: Gluten-Free Baking

Yield: 24 puffs

Dietary: Low-FODMAP, Gluten-Free, Lactose-Free

Published: Sun Aug 03 2025 at 01:05 PM

Last Updated: Wed Aug 06 2025 at 02:35 PM

Ingredients

→ Main Ingredients

01 1.5 cups (190g) tapioca flour/starch
02 1 cup (112g) shredded low-lactose hard cheese (e.g., sharp cheddar, parmesan)
03 1 large egg, at room temperature

→ Wet Ingredients

04 2/3 cup lactose-free milk (or almond milk)
05 1/3 cup garlic-infused oil
06 1 tsp salt

Instructions

Step 01

Preheat oven to 400°F (200°C). Heat milk, oil, and salt in a saucepan until just simmering.

Step 02

Remove from heat, add all tapioca flour, and stir vigorously until a smooth, sticky dough forms. Let cool for 5-10 minutes.

Step 03

Beat the egg into the cooled dough until fully combined (it will look weird at first). Stir in the shredded cheese.

Step 04

Drop rounded tablespoons of the sticky dough onto a parchment-lined baking sheet, about 1-2 inches apart.

Step 05

Bake for 20-25 minutes, without opening the oven for the first 15 minutes, until golden brown and puffed.

Step 06

Let cool for a minute on the pan before serving. They are best enjoyed fresh and warm.

Notes

  1. Use a hard, aged cheese like sharp cheddar for low lactose and great flavor.
  2. The dough is supposed to be very sticky and elastic; this is normal.
  3. Garlic-infused oil provides flavor without triggering IBS symptoms from fructans.

Tools You'll Need

  • Saucepan
  • Wooden spoon
  • Baking sheet
  • Parchment paper
  • Small cookie scoop (optional)

Allergy Information

Please check ingredients for potential allergens and consult a health professional if in doubt.
  • Contains Egg
  • Dairy (low-lactose cheese).

Nutrition Facts (Per Serving)

It is important to consider this information as approximate and not to use it as definitive health advice.
  • Calories: 65
  • Total Fat: 4.5g
  • Total Carbohydrate: 5g
  • Protein: 2g